Information for 6-RYAAGCAWMCARAMGC (Motif 6)

C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
Reverse Opposite:
A C T G A G T C C A G T A C G T A G T C A C G T C T A G A C T G C G T A A G C T C T A G A G T C A C G T A C G T C T A G A G T C
p-value:1e-13
log p-value:-3.185e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 23.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RYAAGCAWMCARAMGC
CAAAAGTAAACAAAG--
 A C G T C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RYAAGCAWMCARAMGC
ATTTGCATACAATGG-
 C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RYAAGCAWMCARAMGC
-WAAGTAAAYA-----
 C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RYAAGCAWMCARAMGC
-AAAGTAAACA-----
 C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RYAAGCAWMCARAMGC
-AAAGTAAACA-----
 C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RYAAGCAWMCARAMGC
--AAGTAAACAAA---
 C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RYAAGCAWMCARAMGC
AAAAAGTAAACAAAGAC
 A C G T C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RYAAGCAWMCARAMGC
GTAAACA---------
 C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:RYAAGCAWMCARAMGC
---AGGAAACAGCTG-
 C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-RYAAGCAWMCARAMGC
AAAAAGTAAACAAACAC
 A C G T C T A G A G T C C G T A C G T A A C T G A G T C C T G A C G A T G T A C A G T C C G T A C T A G C G T A G T C A A C T G A G T C
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C