Information for 19-GAGGATGGTCCTA (Motif 30)

A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A
Reverse Opposite:
C A G T G T C A C T A G A T C G C G T A T A G C G T A C G T C A A C G T A G T C G A T C C G A T A T G C
p-value:1e-7
log p-value:-1.720e+01
Information Content per bp:1.694
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif160.9
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets34.4 +/- 20.9bp
Average Position of motif in Background50.6 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAGGATGGTCCTA
CGTGGGTGGTCC--
 A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGGATGGTCCTA----
--AGATGCTRCTRCCHT
 A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATGGTCCTA--
NNANTGGTGGTCTTNNN
 A C G T A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGGATGGTCCTA
GGNGCGNCTGTTNNN-
 A C G T A C G T A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATGGTCCTA-
NTNTGGGGGGTCNNNA
 A C G T A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGATGGTCCTA
GGAGAAAGGTGCGA
 A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

GLIS3/MA0737.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAGGATGGTCCTA
CTTCGTGGGGGGTC---
 A C G T A C G T A C G T A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGATGGTCCTA
TGGGGAAGGGCM--
 A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GAGGATGGTCCTA
CTTCGCGGGGGGTC---
 A C G T A C G T A C G T A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGATGGTCCTA
GCTTCGTGGGGGGTCT--
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A C A T G A C T G T G C A A C G T A C T G A C T G A C G T A T G C G A T C A C G T G T C A
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T A C G T