Information for 18-CTCTCCTTTTCGT (Motif 29)

A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
Reverse Opposite:
C G T A G T A C C T A G C T G A C G T A C G T A C T G A A C T G A C T G C G T A A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.726e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 19.1bp
Average Position of motif in Background44.7 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF7/MA0772.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCCTTTTCGT
ANTTTCGCTTTCGN
 A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCCTTTTCGT
ASTTTCASTTYC--
 A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCCTTTTCGT
TCACTTTCACTTTCN-
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCCTTTTCGT
ACTTTCACTTTC--
 A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCTCCTTTTCGT
ACTTTCACTTTC--
 A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCCTTTTCGT
RSTTTCRSTTTC--
 A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTCTCCTTTTCGT---
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CTCTCCTTTTCGT
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCTCCTTTTCGT
AGTTTCAGTTTC--
 A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCTCCTTTTCGT
AGTTTCAKTTTC--
 A C G T A G T C A C G T A G T C A C G T A G T C G T A C A G C T A C G T A C G T A G C T A G T C A C T G A C G T
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T