Information for 16-AGTGATGCACAKS (Motif 28)

C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C
Reverse Opposite:
A T C G T G C A C A G T A T C G A C G T C T A G A T G C T C G A A C G T A T G C G T C A A G T C G C A T
p-value:1e-7
log p-value:-1.821e+01
Information Content per bp:1.653
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif522.4
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets49.6 +/- 20.9bp
Average Position of motif in Background51.4 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGTGATGCACAKS
TTRAGTGSYK------
 A C G T A C G T A C G T C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGTGATGCACAKS
----ATGCCCACC
 C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGTGATGCACAKS--
-----TGCCCAGNHW
 C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGTGATGCACAKS---
GGGTGTGCCCAAAAGG
 C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGTGATGCACAKS
-ATGACGTA----
 C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGTGATGCACAKS
CTYRAGTGSY-------
 A C G T A C G T A C G T A C G T C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGTGATGCACAKS
TTGAGTGSTT------
 A C G T A C G T A C G T C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGTGATGCACAKS-
ANANNTGATACCCNATN
 A C G T A C G T A C G T C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGTGATGCACAKS
AGTCACGC-----
 C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGTGATGCACAKS
-GTGGGCCCCA--
 C G T A A C T G C A G T A T C G G T C A A G C T T A C G A G T C G T C A A T G C G T C A A C G T T A G C
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T