Information for 13-CCACTCTGCCAWT (Motif 24)

A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T A C G T A C T G A C T G A G T C C T G A A T C G C G T A A C T G C G A T A C T G C T A G
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 34.2bp
Average Position of motif in Background52.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CCACTCTGCCAWT
------TGCCAA-
 A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCACTCTGCCAWT
----CGTGCCAAG
 A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCACTCTGCCAWT-
----GGTGCCAAGT
 A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCACTCTGCCAWT-
---GTCCGCCATTA
 A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCACTCTGCCAWT
CCCCTCCCCCAC-
 A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CCACTCTGCCAWT
NNAGTCCCACTCNNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACTCTGCCAWT---
TACGCCCCGCCACTCTG
 A C G T A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCACTCTGCCAWT--
---ACTAGCCAATCA
 A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCACTCTGCCAWT---
------AGCCAATCGG
 A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCACTCTGCCAWT
-----TTGCCAAG
 A G T C G T A C C G T A A G T C A C G T A T G C A G C T A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G