Information for 16-TGGGTGCCTGTTGGGD (Motif 23)

A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
Reverse Opposite:
G C T A A G T C A G T C G A T C C T G A G T C A A G T C C G T A C T A G A C T G G T A C C G T A A G T C A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 25.8bp
Average Position of motif in Background62.5 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGTGCCTGTTGGGD
NNNNTTGTGTGCTTNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGGTGCCTGTTGGGD
CTTGAGTGGCT-------
 A C G T A C G T A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGGTGCCTGTTGGGD
TGAGTGACAGSC----
 A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGTGCCTGTTGGGD
NNGCGTGTGTGCNGCN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGGTGCCTGTTGGGD
-CTGTTCCTGG-----
 A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGGGTGCCTGTTGGGD
--ATTTCCTGTN----
 A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGGGTGCCTGTTGGGD
-GGCCYCCTGCTGDGH
 A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTGCCTGTTGGGD
NTGATTGACAGN-----
 A C G T A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGGGTGCCTGTTGGGD
--ACATCCTGNT----
 A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGGGTGCCTGTTGGGD
--ACTTCCTGTT----
 A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G T C C G A T A C T G A C G T A G C T C T A G C T A G A C T G C A G T
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T