Information for 6-AGGCCCTTGA (Motif 22)

C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A
Reverse Opposite:
C G A T A G T C G T C A C T G A T A C G A C T G A C T G G T A C G T A C A G C T
p-value:1e-9
log p-value:-2.129e+01
Information Content per bp:1.840
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif307.0
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets55.3 +/- 16.8bp
Average Position of motif in Background48.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGGCCCTTGA-
ATGACCTTGAA
 C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGGCCCTTGA-
-TGACCTTGAN
 C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGGCCCTTGA-
-TGACCTTGAV
 C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCCTTGA
NATGACCTTGA
 A C G T C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCCTTGA----
GCTGACCTTGAACTN
 A C G T C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AGGCCCTTGA---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGGCCCTTGA---
-TGACCTTGACCT
 C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A A C G T A C G T A C G T
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGCCCTTGA
ATGACCTTGA
 C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGGCCCTTGA---
-TGACCTTGACCT
 C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A A C G T A C G T A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCCTTGA
BNTGDCCTTG-
 A C G T C T G A C A T G C A T G T G A C A G T C A T G C A G C T A C G T A C T G G C T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T