Information for 4-TGACTGACAG (Motif 20)

A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G
Reverse Opposite:
A G T C C G A T A T C G A C G T A T G C C T G A T C A G A G C T A T G C G T C A
p-value:1e-10
log p-value:-2.317e+01
Information Content per bp:1.840
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif252.2
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets56.7 +/- 27.3bp
Average Position of motif in Background50.8 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGACAG-
NTGATTGACAGN
 A C G T A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGACAG-
BTGABTGACAGS
 A C G T A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TGACTGACAG--
TGAGTGACAGSC
 A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:TGACTGACAG
---TTGACAG
 A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TGACTGACAG--
--VBTGWCAGCB
 A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G A C G T A C G T
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TGACTGACAG-
---TTGACAGC
 A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGACTGACAG
--RHTGWCAR
 A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TGACTGACAG-
---TTGACAGG
 A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGACTGACAG------
NNATTGACAGGTGCTT
 A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGACTGACAG------
GATATTGACAGCTGCGT
 A C G T A C G T A T C G C T G A A G T C G A C T A T C G C G T A A T G C C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T