Information for 12-CTTCTGTGTTCATCAM (Motif 18)

A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
Reverse Opposite:
A C T G A C G T C T A G G T C A A C G T C T A G T C G A G T C A A G T C C T G A A G T C C G T A A T C G C G T A C T G A T C A G
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.725
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.6 +/- 17.2bp
Average Position of motif in Background58.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTCTGTGTTCATCAM
CTTATCTCHMCATCT-
 A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTGTGTTCATCAM
CTCATGAATATTCAT---
 A C G T A C G T A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTTCTGTGTTCATCAM
GCTTCC-----------
 A C G T A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTGTGTTCATCAM
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTTCTGTGTTCATCAM
-TTCTATTTTTAGNNN
 A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CTTCTGTGTTCATCAM
--YCTTTGTTCC----
 A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTGTGTTCATCAM
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTTCTGTGTTCATCAM
---GHATATKCAT---
 A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTTCTGTGTTCATCAM
--GCTATTTTTAGC--
 A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTTCTGTGTTCATCAM
-CTTTGTTTACTTTTN
 A G T C A G C T A C G T A T G C A C G T C T A G A G C T T A C G A C G T A G C T A G T C G T C A A C G T A G T C G T C A G T A C
A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G