Information for 8-AAGCAAGGGC (Motif 7)

C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C
Reverse Opposite:
C T A G A T G C A G T C T G A C A C G T C G A T A T C G A T G C C G A T G A C T
p-value:1e-12
log p-value:-2.781e+01
Information Content per bp:1.659
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.85%
Number of Background Sequences with motif1095.0
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets48.1 +/- 24.1bp
Average Position of motif in Background52.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AAGCAAGGGC---
---CAAGGHCANV
 C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGGGC------
TATTCAAGGTCATGCGA
 A C G T C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGGGC
AAGGCAAGTGT
 A C G T C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAAGGGC
VRAACAATGG-
 A C G T C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGCAAGGGC
RAACAATGGN
 C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGCAAGGGC
-AACAAAGG-
 C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGCAAGGGC-
-NTCAAGGTCA
 C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGGGC---
GGAGAAAGGTGCGA
 A C G T C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAAGGGC
AAAACAATGG-
 A C G T C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCAAGGGC-
-BTCAAGGTCA
 C T G A G C T A T A C G T A G C G C T A T G C A A C T G T C A G T A C G G A T C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A