Information for 1-SRGCCAATCAGAG (Motif 1)

A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G
Reverse Opposite:
A T G C C A G T T A G C A G C T A T C G C T G A A G C T C G A T C T A G A C T G A G T C A G C T T A G C
p-value:1e-36
log p-value:-8.373e+01
Information Content per bp:1.618
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif9.05%
Number of Background Sequences with motif646.1
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets49.6 +/- 25.2bp
Average Position of motif in Background49.3 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:SRGCCAATCAGAG
-AGCCAATCGG--
 A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----SRGCCAATCAGAG
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--SRGCCAATCAGAG
ACTAGCCAATCA---
 A C G T A C G T A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-SRGCCAATCAGAG----
TGGACCAATCAGCACTCT
 A C G T A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.73
Offset:3
Orientation:forward strand
Alignment:SRGCCAATCAGAG
---CCAATCAA--
 A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-SRGCCAATCAGAG---
CGACCCAATCAACGGTG
 A C G T A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PH0089.1_Isx/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-SRGCCAATCAGAG--
ACNNCTAATTAGNNNN
 A C G T A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:SRGCCAATCAGAG
---CAAATCACTG
 A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

EN2/MA0642.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:SRGCCAATCAGAG
--CCCAATTAGC-
 A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G
A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T

Lhx8/MA0705.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:SRGCCAATCAGAG
---CTAATTAG--
 A T C G T C G A T C A G A G T C A G T C C G T A C T G A A G C T A T G C C T G A A C T G G C T A T A C G
A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T A C G T