Information for 3-GCCACACTTAATATGG (Motif 5)

T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
Reverse Opposite:
A T G C A T G C C G T A A G C T T G C A A C G T A C G T T C G A C T G A T A C G A C G T T C A G G C A T T A C G A C T G A G T C
p-value:1e-18
log p-value:-4.253e+01
Information Content per bp:1.480
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 20.5bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCACACTTAATATGG
GCCACACCCA------
T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCACACTTAATATGG
GCCACRCCCACY----
T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCACACTTAATATGG
GGCCACACCCAN-----
A C G T T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCACACTTAATATGG
GGCCACACCCA------
A C G T T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCCACACTTAATATGG
NWAACCACADNN-------
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GCCACACTTAATATGG----
--------CAAGATGGCGGC
T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCACACTTAATATGG
TGCCAAAATAAACANN-
A C G T T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCCACACTTAATATGG
CGTGCCAAG----------
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCCACACTTAATATGG
GCCMCRCCCH------
T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCACACTTAATATGG
TGCCAA-----------
A C G T T C A G T A G C A G T C C G T A A G T C G T C A A T G C G A C T A G C T T C G A T G C A A C G T T C G A G C A T T A C G T A C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T