Information for 12-CTCCAGCAGCCAGACT (Motif 20)

A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
Reverse Opposite:
C G T A A C T G A G C T G T A C A G C T A C T G A C T G A G T C C G A T A T C G A G T C A C G T A C T G A C T G C T G A A C T G
p-value:1e-10
log p-value:-2.473e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.4 +/- 31.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGCAGCCAGACT
GGCTCYAKCAYC------
 A C G T A C G T A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCCAGCAGCCAGACT
NNGCAGCTGTC-----
 A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTCCAGCAGCCAGACT-
----AGGTGNCAGACAG
 A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTCCAGCAGCCAGACT
------ATGCCAGACN
 A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCCAGCAGCCAGACT
NNGCAGCTGTT-----
 A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCCAGCAGCCAGACT
----AGGTGHCAGACA
 A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTCCAGCAGCCAGACT
--NCAGCTGCTG----
 A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTCCAGCAGCCAGACT
---CAGCTGNT-----
 A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTCCAGCAGCCAGACT
--CCAACTGCCA----
 A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTCCAGCAGCCAGACT
ATTTCCCAGVAKSCY----
 A C G T A C G T A C G T A G T C A G C T A G T C A G T C C G T A A C T G A T G C C G T A C T A G A G T C A G T C C T G A A C T G C T G A G T A C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T