Information for 11-CCCTTATGAT (Motif 13)

A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T
Reverse Opposite:
C G T A A C G T A G T C T C G A A C G T C G T A C G T A C T A G A C T G A C T G
p-value:1e-13
log p-value:-3.012e+01
Information Content per bp:1.870
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.1 +/- 23.9bp
Average Position of motif in Background55.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTTATGAT--
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTATGAT
BCMATTAG---
 A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCTTATGAT
AACCTTATAT-
 A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTATGAT----
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCCTTATGAT-
-YCTTATCTBN
 A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTTATGAT
ACCACTTAA---
 A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTATGAT
NNCAATTANN--
 A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCTTATGAT-
-YCTTATCWVN
 A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCTTATGAT
NCCTTATCTG
 A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCTTATGAT
NNCTTATCTN
 A G T C A G T C A G T C A C G T A C G T C G T A A C G T T A C G C G T A C G A T
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C