Information for 15-AGTGCGCCGG (Motif 20)

C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
Reverse Opposite:
G A T C G T A C A C T G A T C G T G A C A C T G G T A C C G T A A T G C A G C T
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif112.2
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets60.3 +/- 24.8bp
Average Position of motif in Background49.9 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGTGCGCCGG
AGCGCGCC--
 C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCGCCGG--
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTGCGCCGG
---GCTCCG-
 C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCGCCGG
TTGAGTGSTT---
 A C G T A C G T A C G T C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTGCGCCGG
CNGTCCTCCC-
 A C G T C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCGCCGG
TTAAGTGCTT---
 A C G T A C G T A C G T C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCGCCGG
NTCAAGTGG-----
 A C G T A C G T A C G T A C G T C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGTGCGCCGG---
--TGCGCAGGCGC
 C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGTGCGCCGG
BTBRAGTGSN----
 A C G T A C G T A C G T A C G T C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCGCCGG
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T C T G A A T C G C G A T A C T G G T A C A C T G A T G C G T A C A C T G C T A G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T