Information for 12-TGGGKRGGAATTG (Motif 17)

A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G A T A C G T A G T C A G T C A G T C G T A C A G T C A G T C A G T C T C G A
p-value:1e-10
log p-value:-2.449e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 28.3bp
Average Position of motif in Background37.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGGGKRGGAATTG
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGGGKRGGAATTG
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

ZNF740/MA0753.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGGGKRGGAATTG
GTGGGGGGGG----
 A C G T A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGGKRGGAATTG
BTKGGCGGGAAA--
 A C G T A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGGGKRGGAATTG----
-----GGGAATTGTAGT
 A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGGGKRGGAATTG
---AGAGGAAGTG
 A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGGGKRGGAATTG-------
---GGAAAAATTGTTAGGAA
 A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGGGKRGGAATTG
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGKRGGAATTG
CWGGCGGGAA---
 A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGGKRGGAATTG
-GGGCGGGAAGG-
 A G C T A C T G A C T G A C T G A C T G T C A G A C T G A C T G C G T A C G T A A C G T A C G T A C T G
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T