Information for 5-TTCTCTCCWGTGTGTK (Motif 5)

A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G
Reverse Opposite:
G T A C G C T A T A G C C G T A A G T C C G T A A G T C C G T A A T C G T A C G C T G A C T A G C G T A A C T G T C G A C G T A
p-value:1e-15
log p-value:-3.608e+01
Information Content per bp:1.738
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.1 +/- 29.9bp
Average Position of motif in Background48.7 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TTCTCTCCWGTGTGTK
------CCTTTGTT--
 A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TTCTCTCCWGTGTGTK
-------CTTTGT---
 A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

TBX19/MA0804.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCTCCWGTGTGTK---
TTTCACACCTAGGTGTGAAN
 A C G T A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G A C G T A C G T A C G T
C G A T C G A T G A C T T G A C C T G A G A T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T T C A G G A C T A C T G C T G A G T C A G C T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCTCCWGTGTGTK
NTCNTCCCCTATNNGNN
 A C G T A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTCTCTCCWGTGTGTK---
---ANTCCTTTGTCTNNNN
 A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TTCTCTCCWGTGTGTK
------CCWTTGTYYB
 A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

T/MA0009.2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTCTCTCCWGTGTGTK-
-TCACACCTAGGTGTGA
 A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G A C G T
A C G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTCTCTCCWGTGTGTK--
---NNNCCATTGTGTNAN
 A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G A C G T A C G T
A C G T A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TTCTCTCCWGTGTGTK--
-TGTTCCCATTGTGTACT
 A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G A C G T A C G T
A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TTCTCTCCWGTGTGTK
------CCWTTGTY--
 A C G T A G C T G T A C C G A T A G T C A G C T A T G C A T G C G C A T C T A G A C G T C T A G A C G T A C T G C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T