Information for 16-GGAAAGTGCTAAA (Motif 21)

A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A G T C A G T C
p-value:1e-7
log p-value:-1.628e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 17.9bp
Average Position of motif in Background48.9 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGAAAGTGCTAAA
--AAGGTGTKAA-
 A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGAAAGTGCTAAA
---AGGTGTTAAT
 A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGTGCTAAA-
ATGGAAAGTCGTAAAA
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAGTGCTAAA-
TAGAANVTTCTAGAA
 A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGTGCTAAA
NNTGGAAANN------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGTGCTAAA
AATGGAAAAT------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGAAAGTGCTAAA
--AAGGTGTGAAA
 A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

HSF1/MA0486.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAAAGTGCTAAA-
-GAACGTTCTAGAA
 A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C G T
A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAAAGTGCTAAA-
-GAANGTTCTAGAA
 A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C G T
A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGTGCTAAA---
TACTAAGTACTTAAATG
 A C G T A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G