Information for 11-CAGCAGGATGTCG (Motif 16)

A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
Reverse Opposite:
A G T C A C T G C G T A A G T C C G T A A G C T A G T C A G T C A C G T A C T G A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.945
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.6 +/- 29.9bp
Average Position of motif in Background73.8 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CAGCAGGATGTCG
-ANCAGGATGT--
 A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGGATGTCG
CACAGCAGGGGG---
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGATGTCG
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAGCAGGATGTCG-
--ACAGGATGTGGT
 A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G A C G T
A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGATGTCG
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGATGTCG
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGATGTCG
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAGGATGTCG
CACAGCGGGGGGTC-
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGCAGGATGTCG
-ANCAGGAAGT--
 A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGATGTCG
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G C T A G C T G A A C G T A C T G A C G T A G T C C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T