Information for 5-CCCGCCAGGGGGC (Motif 10)

A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C
Reverse Opposite:
T C A G T A G C A G T C T G A C G T A C A T G C C A G T T A C G T A C G G A T C T A C G C T A G T A C G
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.746
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif159.2
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets50.5 +/- 19.7bp
Average Position of motif in Background45.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCCGCCAGGGGGC-------
GCCASCAGGGGGCGCYVNNG
 A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCAGGGGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCCGCCAGGGGGC-
CCCCCCCGGGGGNN
 A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCCAGGGGGC-
NCCCCCCCGGGGGGN
 A C G T A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCCAGGGGGC-
ACCCCCCCGGGGGGN
 A C G T A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCAGGGGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCCAGGGGGC-
DCHCAGCAGGRGGCC
 A C G T A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCCGCCAGGGGGC-
--TGTCAGGGGGCG
 A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCCAGGGGGC-
NCNCAGCGGGGGGTC
 A C G T A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCAGGGGGC
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T G C C T A G A T G C A T G C G T C A A T C G C A T G A C T G T A C G A C T G A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T