Information for 9-CGGGGTGAAT (Motif 22)

A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T
Reverse Opposite:
C T G A A G C T A C G T A T G C C G T A A G T C G T A C A T G C A G T C A C T G
p-value:1e-6
log p-value:-1.521e+01
Information Content per bp:1.833
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.6 +/- 20.1bp
Average Position of motif in Background51.8 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CGGGGTGAAT---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CGGGGTGAAT--
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGTGAAT---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGGGGTGAAT
AAGGTGTGAA-
 A C G T A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGGGTGAAT
AGGTGTGA--
 A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGGGGTGAAT--
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGGGTGAAT
AGGTGTGA--
 A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGGGTGAAT
AGGTGTGA--
 A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGGGGTGAAT---
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGGGTGAAT
TAGGTGTGAAG
 A C G T A G T C A C T G A T C G A C T G A C T G A C G T A T C G C G T A C T G A A G C T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G