Information for 4-BGATTGGCYA (Motif 5)

A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A
Reverse Opposite:
A G C T T C G A A C T G A G T C G T A C C G T A T G C A A C G T T A G C T G C A
p-value:1e-17
log p-value:-3.981e+01
Information Content per bp:1.720
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.96%
Number of Background Sequences with motif219.5
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets45.3 +/- 24.7bp
Average Position of motif in Background50.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:BGATTGGCYA--
TGATTGGCTANN
 A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-BGATTGGCYA
CCGATTGGCT-
 A C G T A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-BGATTGGCYA----
CTGATTGGTCNATTT
 A C G T A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:BGATTGGCYA
---TTGGCA-
 A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.74
Offset:-7
Orientation:forward strand
Alignment:-------BGATTGGCYA-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:BGATTGGCYA-
--NTTGGCANN
 A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-BGATTGGCYA
TTGATTGN---
 A C G T A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------BGATTGGCYA-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:BGATTGGCYA-
-NNTTGGCANN
 A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-BGATTGGCYA-
BTGABTGACAGS
 A C G T A C G T A T C G C G T A A C G T C G A T A C T G A C T G G T A C A G C T T C G A A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C