Information for 3-NGTGACGTCA (Motif 4)

T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A
Reverse Opposite:
A C G T A C T G C T G A A G T C C T A G G A C T T A G C T C G A A G T C A C T G
p-value:1e-27
log p-value:-6.328e+01
Information Content per bp:1.658
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif7.79%
Number of Background Sequences with motif567.4
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets54.9 +/- 20.0bp
Average Position of motif in Background49.4 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NGTGACGTCA---
-GTGACGTCACCG
 T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A A C G T A C G T A C G T
A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.92
Offset:2
Orientation:forward strand
Alignment:NGTGACGTCA
--TGACGTCA
 T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.91
Offset:0
Orientation:forward strand
Alignment:NGTGACGTCA
GATGACGTCA
 T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--NGTGACGTCA----
ACGATGACGTCATCGA
 A C G T A C G T T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A A C G T A C G T A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

Creb5/MA0840.1/Jaspar

Match Rank:5
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:NGTGACGTCA--
NGTGACGTCATN
 T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A A C G T A C G T
C T A G T C A G C G A T C A T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T A G C T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:6
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:NGTGACGTCA--
GATGACGTCATC
 T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-NGTGACGTCA-
NGRTGACGTCAY
 A C G T T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A A C G T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

PB0038.1_Jundm2_1/Jaspar

Match Rank:8
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--NGTGACGTCA----
NCGATGACGTCATCGN
 A C G T A C G T T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A A C G T A C G T A C G T A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G

Atf1/MA0604.1/Jaspar

Match Rank:9
Score:0.86
Offset:1
Orientation:forward strand
Alignment:NGTGACGTCA
-ATGACGTA-
 T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T

ATF7/MA0834.1/Jaspar

Match Rank:10
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-NGTGACGTCA---
NGATGACGTCATNN
 A C G T T G A C T C A G A C G T A T C G C T G A A G T C T C A G G A C T T G A C T G C A A C G T A C G T A C G T
A G T C C A T G T C G A G A C T A C T G G T C A A G T C T C A G G A C T G T A C G T C A A G C T G A T C T C A G