Information for 24-MTTATACTAAAGT (Motif 38)

G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
Reverse Opposite:
C G T A G T A C A C G T A C G T G C A T C G T A A T C G G A C T C G T A A G C T G T C A C T G A A C T G
p-value:1e-4
log p-value:-1.030e+01
Information Content per bp:1.729
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif153.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.4 +/- 24.7bp
Average Position of motif in Background50.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0069.1_Sox21_1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----MTTATACTAAAGT
TTTAATTATAATTAAG-
 A C G T A C G T A C G T A C G T G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----MTTATACTAAAGT
NANTATTATAATTNNN-
 A C G T A C G T A C G T A C G T G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----MTTATACTAAAGT
TAAGATTATAATACGG-
 A C G T A C G T A C G T A C G T G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----MTTATACTAAAGT
GCTAATTATAATTATC-
 A C G T A C G T A C G T A C G T G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T

PH0038.1_Hlx/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:MTTATACTAAAGT----
--TGTAATTAATTATGG
 G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---MTTATACTAAAGT
NNNTTTNTAATACNG-
 A C G T A C G T A C G T G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--MTTATACTAAAGT
TAATTGTTCTAAAC-
 A C G T A C G T G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:MTTATACTAAAGT-------
---NTNNTTAAGTGGNTNAN
 G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----MTTATACTAAAGT
TTCAATTGTTCTAAAA-
 A C G T A C G T A C G T A C G T G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----MTTATACTAAAGT
AANTTATTGTTCTNNA--
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T C A G T T C G A C G A T C G T A T A G C C G A T C G T A T G C A C G T A C A T G A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T