Information for 18-YATGTTTRACTAATTG (Motif 34)

A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G
Reverse Opposite:
G A T C G T C A C G T A C G A T C A G T G T C A A C T G A G C T A G C T C G T A G T C A G T C A G T A C C G T A A C G T T C A G
p-value:1e-6
log p-value:-1.498e+01
Information Content per bp:1.731
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif56.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets36.0 +/- 21.8bp
Average Position of motif in Background50.8 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:YATGTTTRACTAATTG--
-ATGGTTCAATAATTTTG
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G A C G T A C G T
A C G T C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

PH0018.1_Dbx1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-YATGTTTRACTAATTG
TNATTATTAATTAATTA
 A C G T A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.59
Offset:8
Orientation:forward strand
Alignment:YATGTTTRACTAATTG
--------AATAATT-
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YATGTTTRACTAATTG-
NNTTATTAATTAATNCN
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

PH0093.1_Lhx3/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YATGTTTRACTAATTG-
NNTATTTAATTAATTNN
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YATGTTTRACTAATTG-
ANNATTTAATTAATTNN
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0007.1_Barx1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:YATGTTTRACTAATTG----
----ATNNACTAATTACTTT
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:YATGTTTRACTAATTG-
AGTTTTTAATTAATTTG
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YATGTTTRACTAATTG-
NNTTTTTAATTAATTCG
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0092.1_Lhx2/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:YATGTTTRACTAATTG------
-----TAAACTAATTAGTGAAC
 A G T C C G T A A C G T A C T G A C G T A C G T C G A T T C G A C T G A G T A C A C G T G C T A C G T A G A C T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C