Information for 3-GTCATCTGTTGCTAGG (Motif 3)

T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G
Reverse Opposite:
T G A C G T A C A G C T C T G A A C T G G T A C C T G A G T C A G T A C G T C A T A C G T C G A C A G T C T A G G T C A A T G C
p-value:1e-31
log p-value:-7.348e+01
Information Content per bp:1.665
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.6 +/- 19.6bp
Average Position of motif in Background47.7 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.81
Offset:5
Orientation:reverse strand
Alignment:GTCATCTGTTGCTAGG-
-----CTGTTGCTAGGS
 T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GTCATCTGTTGCTAGG---
----NCCGTTGCTANGNGN
 T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCATCTGTTGCTAGG-------
NTNNNNNGTTGCTANGGNNCANA
 T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GTCATCTGTTGCTAGG---
----NNCGTTGCTATGGNN
 T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:GTCATCTGTTGCTAGG-----
------KGTTGCTAGGMAACA
 T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

SCRT2/MA0744.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTCATCTGTTGCTAGG
-CCACCTGTTGCAT--
 T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G
A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCATCTGTTGCTAGG
ANCCACCTGTTGCNC--
 A C G T T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GTCATCTGTTGCTAGG-----
-------GTTGCCATGGNAAC
 T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCATCTGTTGCTAGG
GTCWGCTGTYYCTCT-
 T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCATCTGTTGCTAGG
CNGACACCTGTTCNNN--
 A C G T A C G T T A C G A C G T G A T C G T C A A G C T A T G C C A G T A C T G A C G T G A C T C A T G A G T C A G C T T C G A C A T G A C T G
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C A C G T A C G T