Information for 16-TCTCACACTCATTBGT (Motif 28)

A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
Reverse Opposite:
C G T A G T A C T C A G C G T A G T C A C A G T C A T G C G T A T C A G C G A T C A T G C A G T C T A G G C T A A C T G C G T A
p-value:1e-8
log p-value:-2.024e+01
Information Content per bp:1.732
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 21.4bp
Average Position of motif in Background52.7 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTCACACTCATTBGT
TGTCTGDCACCT------
 A C G T A C G T A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCTCACACTCATTBGT
CTGTCTGTCACCT------
 A C G T A C G T A C G T A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCTCACACTCATTBGT
CTTTCANTATGACTV--
 A C G T A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCTCACACTCATTBGT
-CRCCCACGCA-----
 A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TCTCACACTCATTBGT
NAGTTTCABTHTGACTNW-
 A C G T A C G T A C G T A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A A C G T

PH0033.1_Gbx1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCTCACACTCATTBGT----
---TNCACTAATTAGTNNNN
 A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T G C A T G A C T G C A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A G C T A C T G T A C G G A T C C G T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TCTCACACTCATTBGT
GSCTGTCACTCA-----
 A C G T A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TCTCACACTCATTBGT
NNTTTTCACACCTTNNN--
 A C G T A C G T A C G T A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TCTCACACTCATTBGT----
---ANCGCTAATTGGTCTNN
 A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TCTCACACTCATTBGT
--TCACACCT------
 A C G T G T A C C G A T A G T C G C T A G A T C C G T A A G T C A C G T G A T C G C T A A C G T A C G T A G C T A C T G C G A T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T