Information for 19-CGCRCTCCTGGRA (Motif 27)

A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A
Reverse Opposite:
A C G T A G T C A G T C G A T C T C G A C T A G T C A G C T G A C T A G A G T C T A C G A G T C A T C G
p-value:1e-8
log p-value:-2.037e+01
Information Content per bp:1.683
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif186.6
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets47.4 +/- 25.4bp
Average Position of motif in Background48.9 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCRCTCCTGGRA-
NNNCTTTCCAGGAAA
 A C G T A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CGCRCTCCTGGRA-
----TTCCNGGAAG
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A A C G T
A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CGCRCTCCTGGRA--
----CTTCTGGGAAA
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGCRCTCCTGGRA-
---TTTCCTGGAAA
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A A C G T
A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGCRCTCCTGGRA--
---TTTCCNGGAAAN
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Gabpa/MA0062.2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCRCTCCTGGRA
NCCACTTCCGG--
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGCRCTCCTGGRA---
-RGSMTBCTGGGAAAT
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCRCTCCTGGRA--
-NNCTTCCNGGAAGN
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A A C G T A C G T
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCRCTCCTGGRA-
NNNTTTCCTGGAAA
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

ELK4/MA0076.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCRCTCCTGGRA
-CCACTTCCGGC-
 A T G C T C A G A T G C C T A G A G T C A G C T A G T C A G T C A G C T C A T G C T A G T C A G G T C A
A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T