p-value: | 1e-9 |
log p-value: | -2.099e+01 |
Information Content per bp: | 1.876 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.82% |
Number of Background Sequences with motif | 6.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 59.5 +/- 13.8bp |
Average Position of motif in Background | 52.7 +/- 28.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCATKMTTCMTS- ATGAATWATTCATGA |
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OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
Match Rank: | 2 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCATKMTTCMTS- ATGCATWATGCATRW |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 3 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCATKMTTCMTS TGAATTATGCAT- |
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POU4F1/MA0790.1/Jaspar
Match Rank: | 4 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCATKMTTCMTS ATGAATAATTAATG |
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POU4F3/MA0791.1/Jaspar
Match Rank: | 5 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCATKMTTCMTS-- ATGCATAATTAATGAG |
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POU4F2/MA0683.1/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCATKMTTCMTS-- ATGCATAATTAATGAG |
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NFE2/MA0841.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCATKMTTCMTS --CATGACTCATC |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGCATKMTTCMTS --GAATATTCAT- |
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PB0146.1_Mafk_2/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGCATKMTTCMTS CCTTGCAATTTTTNN- |
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JDP2/MA0655.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGCATKMTTCMTS ---ATGAGTCAT- |
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