Information for 16-CAGTATAGTACCA (Motif 23)

A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A
Reverse Opposite:
A C G T A C T G T A C G C G A T T C G A G T A C C G A T G C T A A C G T C G T A G T A C C G A T T C A G
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.689
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif63.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets63.6 +/- 25.7bp
Average Position of motif in Background55.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGTATAGTACCA---
-ADGGYAGYAGCATCT
 A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T A C G T A C G T
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGTATAGTACCA---
ATGTACAGTAGCAAAG
 A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGTATAGTACCA---
ATTTACAGTAGCAAAA
 A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTATAGTACCA-----
CACAAGGGARWARGRCACCATGAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
T A G C T G C A G T A C C T G A C T G A T A C G C T A G C T A G C T G A T C A G C G A T T C G A C T G A C T A G T C A G A G T C C G T A A G T C G T A C C T G A C G A T A C T G C T G A C T A G A T C G

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CAGTATAGTACCA--
----AATGTATCAAT
 A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGTATAGTACCA--
NGNTCTAGAACCNGV
 A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CAGTATAGTACCA-----
-TTCNAAGTACTTNNNNN
 A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CAGTATAGTACCA
CTGTCTGTCACCT
 A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CAGTATAGTACCA-
--SCCTAGCAACAG
 A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CAGTATAGTACCA---
NNGATCTAGAACCTNNN
 A C G T A G T C C G T A A C T G C G A T T C G A C G A T C G T A A C T G A C G T C G T A A T G C G T A C G T C A A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G