Information for 10-TMCTMRGCWGCGC (Motif 10)

A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C C G T A A C T G A G T C G A T C A C T G C G T A A C T G A C T G C G T A
p-value:1e-11
log p-value:-2.753e+01
Information Content per bp:1.851
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 27.4bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TMCTMRGCWGCGC
--CGCAGCTGCG-
 A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TMCTMRGCWGCGC---
CTCAGCAGCTGCTACTG
 A C G T A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TMCTMRGCWGCGC
----CAGCTGNT-
 A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TMCTMRGCWGCGC--
TCNCCTGCTGNGNNN
 A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TMCTMRGCWGCGC-
---GCGCCTGCGCA
 A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C A C G T
A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TMCTMRGCWGCGC-------
------GCCGCGCAGTGCGT
 A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TMCTMRGCWGCGC
-NAHCAGCTGD--
 A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TMCTMRGCWGCGC
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TMCTMRGCWGCGC
-NNACAGCTGC--
 A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TMCTMRGCWGCGC--
NNTCCTGCTGTGNNN
 A C G T G T A C G T A C C G A T G T A C C T A G A C T G A G T C C G A T A C T G A G T C A C T G A G T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C