Information for 7-GCTGGCCTCTGGVGCT (Motif 6)

C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A G T C G T A C C G T A A C T G C G T A A C T G C T A G A G T C A G T C C T G A A C T G A G T C
p-value:1e-18
log p-value:-4.322e+01
Information Content per bp:1.888
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.9 +/- 21.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTGGCCTCTGGVGCT
-CTGACCTTTG-----
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTGGCCTCTGGVGCT-
--TGACCTTTTGACCTC
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T A C G T
A C G T A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTGGCCTCTGGVGCT-
--TGGACTTTGNNCTCN
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTGGCCTCTGGVGCT--
--TGGACTTTGNNCTNTG
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCTGGCCTCTGGVGCT
-NTNGCCTCAGGCNNN
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T
A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCTGGCCTCTGGVGCT
-WTGSCCTSAGGS---
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCTGGCCTCTGGVGCT
-ATGCCCTGAGGC---
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCTGGCCTCTGGVGCT--
--TGACCTTTTGACCTTT
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCTGGCCTCTGGVGCT
---GTCCCCAGGGGA-
 C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T
A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GCTGGCCTCTGGVGCT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T A G A G T C A G C T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C T G T C G A A C T G A G T C A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C