Information for 5-CHAGAGGGCCCCA (Motif 4)

A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A
Reverse Opposite:
A G C T C T A G A C T G A T C G A C T G A G T C A G T C G T A C A C G T G A T C A C G T C T G A A T C G
p-value:1e-17
log p-value:-3.978e+01
Information Content per bp:1.812
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.2 +/- 11.9bp
Average Position of motif in Background57.5 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CHAGAGGGCCCCA
---GTGGGCCCCA
 A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A
A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CHAGAGGGCCCCA
CCCCCTTGGGCCCC-
 A C G T A C G T A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CHAGAGGGCCCCA
CAAGATGGCGGC-
 A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CHAGAGGGCCCCA
CAAGATGGCGGC-
 A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CHAGAGGGCCCCA---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CHAGAGGGCCCCA----
-TTGGGGGCGCCCCTAG
 A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CHAGAGGGCCCCA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CHAGAGGGCCCCA-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CHAGAGGGCCCCA-----
AAAAATGGCGCCATTTTT
 A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CHAGAGGGCCCCA----
-AAAATGGCGCCATTTT
 A T G C G A C T G T C A C A T G C G T A A C T G A C T G A C T G A G T C A T G C G T A C A G T C T C G A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T