| p-value: | 1e-10 |
| log p-value: | -2.373e+01 |
| Information Content per bp: | 1.849 |
| Number of Target Sequences with motif | 9.0 |
| Percentage of Target Sequences with motif | 1.04% |
| Number of Background Sequences with motif | 17.3 |
| Percentage of Background Sequences with motif | 0.04% |
| Average Position of motif in Targets | 46.0 +/- 25.5bp |
| Average Position of motif in Background | 58.0 +/- 26.4bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 1 |
| Score: | 0.61
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CHCTGVCCTCCCG
---TGACCYCT-- |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 2 |
| Score: | 0.61
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CHCTGVCCTCCCG
---TGACCTYA-- |
|
|
|
NR2C2/MA0504.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CHCTGVCCTCCCG
TGACCTCTGACCCCN-- |
|
|
|
CRE(bZIP)/Promoter/Homer
| Match Rank: | 4 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CHCTGVCCTCCCG
CGGTGACGTCAC- |
|
|
|
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer
| Match Rank: | 5 |
| Score: | 0.58
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CHCTGVCCTCCCG
TGACCTTTGACCTC--- |
|
|
|
CREB1/MA0018.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.57
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CHCTGVCCTCCCG
---TGACGTCA-- |
|
|
|
NR4A2/MA0160.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.56
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CHCTGVCCTCCCG
--GTGACCTT--- |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 8 |
| Score: | 0.56
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CHCTGVCCTCCCG
---TGACCT---- |
|
|
|
E2F4/MA0470.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | 5
| | Orientation: | reverse strand |
| Alignment: | CHCTGVCCTCCCG---
-----NNTTCCCGCCC |
|
|
|
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CHCTGVCCTCCCG
AGGTCANTGACCTN--- |
|
|
|
