Information for 6-AGAGAGCAGC (Motif 11)

G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C
Reverse Opposite:
C T A G A T G C A C G T C A T G G A T C C A G T G A T C C A G T A G T C A C G T
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.726
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif827.6
Percentage of Background Sequences with motif1.73%
Average Position of motif in Targets51.1 +/- 26.3bp
Average Position of motif in Background48.7 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:AGAGAGCAGC-
------CAGCC
 G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGCAGC
CAAAGGTCAG-
 A C G T G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGAGAGCAGC-
-GGGAGGACNG
 G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGAGAGCAGC----
----AGCAGCTGCT
 G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAGAGCAGC-------
NNNNAGCAGCTGCTGAN
 G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGAGAGCAGC------
----AGCAGCTGCTNN
 G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGAGAGCAGC
----CACAGN
 G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGAGAGCAGC--
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAGAGCAGC------
-GAGCACAGCAGGACA
 G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGAGAGCAGC--
----AACAGCTG
 G T C A C T A G G T C A C T A G G T C A C T A G G T A C C G T A T A C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G