Information for 5-CCCCGCCCMC (Motif 3)

A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C
Reverse Opposite:
T C A G C A G T A C T G A C T G A C T G G T A C A T C G C A T G C T A G T A C G
p-value:1e-23
log p-value:-5.359e+01
Information Content per bp:1.785
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif14.25%
Number of Background Sequences with motif2180.5
Percentage of Background Sequences with motif5.34%
Average Position of motif in Targets50.7 +/- 30.2bp
Average Position of motif in Background48.1 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCCMC
GCCCCGCCCCC
 A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCCMC-
GCCMCGCCCMCY
 A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C A C G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCCMC-
GCTCCGCCCMCY
 A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCCMC---
CCCCCGCCCCCGCC
 A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C A C G T A C G T A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCCMC
GCCCCGCCCC-
 A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGCCCMC-
NAGCCCCGCCCCCN
 A C G T A C G T A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCCMC----
GCCCCGCCCCCTCCC
 A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCCMC
GCCACGCCCCC
 A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

SP3/MA0746.1/Jaspar

Match Rank:9
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCCMC
GCCACGCCCCC
 A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CCCCGCCCMC
GGCCCCGCCCCC
 A C G T A C G T A T G C A G T C G T A C A T G C C A T G A G T C A G T C A G T C G T C A A G T C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C