Information for 13-ATGGGAACAA (Motif 21)

C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
Reverse Opposite:
C G A T A C G T A T C G C G A T C G A T G T A C A G T C A G T C T G C A G A C T
p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.684
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif209.6
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets61.1 +/- 25.4bp
Average Position of motif in Background51.0 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAACAA
CSTGGGAAAD-
 A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAACAA
AATGGAAAAT-
 A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAACAA
NATGGAAAAN-
 A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGGAACAA
TTGCCATGGCAACC-
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATGGGAACAA
SCCTAGCAACAG
 A C G T A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGGAACAA
TTGCCATGGCAACN-
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ATGGGAACAA
GTTGCCATGGCAAC--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAACAA
AATGGAAAAT-
 A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAACAA
NNTGGAAANN-
 A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATGGGAACAA--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T A G C A T G G C T A C G T A T A G C G T C A G C T A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C