Information for 11-TGCGCTAGTTGTG (Motif 16)

A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G
Reverse Opposite:
A G T C C T G A A G T C T C G A C G T A T A G C G C A T C G T A A C T G A G T C A T C G A G T C T C G A
p-value:1e-9
log p-value:-2.162e+01
Information Content per bp:1.824
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.6 +/- 26.9bp
Average Position of motif in Background57.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCGCTAGTTGTG----
--GTNTTGTTGTGANNT
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGCGCTAGTTGTG--
---GCTATTTTTGGM
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGCGCTAGTTGTG
--NGCTN------
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCGCTAGTTGTG----------
-GTGCTAATTGTGTGTGTACGCT
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGCGCTAGTTGTG--
---KCTATTTTTRGH
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGCGCTAGTTGTG
TGACCTARTT---
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TGCGCTAGTTGTG--
---GCTATTTTTAGC
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

EN2/MA0642.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TGCGCTAGTTGTG
---GNTAATTGGN
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G
A C G T A C G T A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TGCGCTAGTTGTG-
----CTATTTTTGG
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:TGCGCTAGTTGTG---
-----TAGGTGTGAAG
 A C G T A C T G A T G C A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C T G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G