Information for 7-GTCMCGTGAKGMCSSG (Motif 12)

A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
Reverse Opposite:
A G T C A T C G A T C G A T C G A C T G G T A C G T C A A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 25.3bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTCMCGTGAKGMCSSG
GTCACGTGAT------
 A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTCMCGTGAKGMCSSG
GTCACGTGAT------
 A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCMCGTGAKGMCSSG
GTCACGTGAC------
 A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GTCMCGTGAKGMCSSG
CCGGTCACGTGA-------
 A C G T A C G T A C G T A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GTCMCGTGAKGMCSSG
BRGTCACGTGAC------
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTCMCGTGAKGMCSSG
GTCACGTGAT------
 A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTCMCGTGAKGMCSSG
GTCACGTGNT------
 A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTCMCGTGAKGMCSSG
ATCACGTGAT------
 A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTCMCGTGAKGMCSSG
GTCACGTGAN------
 A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTCMCGTGAKGMCSSG
GGTCACGTGC-------
 A C G T A C T G A C G T A G T C G T C A A G T C C T A G A C G T A C T G G T C A A C G T A C T G G T A C A T G C A T G C T A G C A C T G
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T