Information for 23-AGKCACGTGGCYCACA (Motif 33)

C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
Reverse Opposite:
A C G T A T C G C G A T A T C G C T G A T A C G G A T C A G T C C G T A T A G C A C T G G C A T A C T G T G C A A G T C C G A T
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.735
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.9 +/- 23.8bp
Average Position of motif in Background52.3 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGKCACGTGGCYCACA
NNGTCGCGTGNCAC---
 A C G T C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGKCACGTGGCYCACA
-GGCACGTGTC-----
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGKCACGTGGCYCACA
GGTCACATGAC-----
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGKCACGTGGCYCACA
-GTCACGTGAT-----
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGKCACGTGGCYCACA
-GTCACGTGNT-----
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGKCACGTGGCYCACA
-GTCACGTGGM-----
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGKCACGTGGCYCACA
-GACACGTGCC-----
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGKCACGTGGCYCACA
GGTCACGTGGC-----
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGKCACGTGGCYCACA
-GHCACGTG-------
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGKCACGTGGCYCACA
-GNCACGTG-------
 C G T A C T A G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C T A G A G T C G A C T A T G C C G T A A T G C G T C A
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T