Information for 6-CAGTGGTGTGTTA (Motif 18)

A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A
Reverse Opposite:
A C G T T C G A G C T A G A T C C G T A T A G C C G T A A T G C G T A C C G T A A T G C C G A T T A C G
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.667
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif121.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets46.8 +/- 26.6bp
Average Position of motif in Background46.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:1
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAGTGGTGTGTTA--
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGGTGTGTTA
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGTGGTGTGTTA
--ATGGGGTGAT-
 A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGTGGTGTGTTA-
--GTGGCGTGACNG
 A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A A C G T
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGTGGTGTGTTA-
NNGTANTGTTTTNC
 A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGTGGTGTGTTA
--ATGGGGTGAT-
 A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGTGGTGTGTTA
--GTGGGGTGAT-
 A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A
A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGGTGTGTTA
NNNNTGCCAGTGATTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGTGGTGTGTTA
GCTGTGGTTT----
 A C G T A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGTGGTGTGTTA
TTRAGTGSYK-----
 A C G T A C G T A G T C C G T A A T C G A C G T A C T G T A C G A C G T A C T G G C A T C A T G C G A T A G C T G T C A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T