Information for 11-MTTTSSCCTTKGKAMA (Motif 12)

G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T T G C A A G T C G T C A C G T A C G T A A C T G A T C G A T C G A T C G C G T A C G T A C G T A A C G T
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.852
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 12.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:MTTTSSCCTTKGKAMA
--CTGACCTTTG----
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:MTTTSSCCTTKGKAMA
-BNTGDCCTTG-----
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:MTTTSSCCTTKGKAMA--
---TGGACTTTGNNCTCN
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

IRF7/MA0772.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-MTTTSSCCTTKGKAMA
ANTTTCGCTTTCGN---
 A C G T G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:MTTTSSCCTTKGKAMA
---TGACCTTGAV---
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:MTTTSSCCTTKGKAMA
---TGACCTTGAN---
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:MTTTSSCCTTKGKAMA
--NTGACCTTGA----
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MTTTSSCCTTKGKAMA--
-TGTTCCCATTGTGTACT
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A A C G T A C G T
A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:MTTTSSCCTTKGKAMA---
---TGGACTTTGNNCTNTG
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:MTTTSSCCTTKGKAMA
------CCTTTGTT--
 G T C A A C G T A C G T A C G T A T G C A T G C A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T