Information for 4-TGACCTYTGM (Motif 4)

A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A
Reverse Opposite:
C A G T A T G C G T C A T C G A C T G A A C T G C A T G C A G T A T G C C G T A
p-value:1e-31
log p-value:-7.366e+01
Information Content per bp:1.694
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif13.15%
Number of Background Sequences with motif1608.5
Percentage of Background Sequences with motif3.33%
Average Position of motif in Targets51.0 +/- 23.7bp
Average Position of motif in Background50.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTYTGM
CTGACCTTTG-
 A C G T A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.91
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTYTGM--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.90
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTYTGM
CNNTTGACCTTTG-
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TGACCTYTGM
TGACCYCT--
 A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.90
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTYTGM--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGACCTYTGM
TGACCTYA--
 A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGACCTYTGM
TGACCT----
 A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TGACCTYTGM--
TGACCTTTNCNT
 A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCTYTGM--
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGACCTYTGM----
TGACCTTTGACCTC
 A C G T A T C G G T C A G T A C G T A C A G C T A G C T A C G T T A C G G T C A A C G T A C G T A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C