Information for 3-GMCGGGAGATGTAGTT (Motif 8)

A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T
Reverse Opposite:
G T C A C T G A A G T C A C G T C G T A A G T C G C T A C G A T A G T C A C G T A G T C A G T C A G T C C A T G A C T G A G T C
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.724
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.9 +/- 28.0bp
Average Position of motif in Background50.2 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:GMCGGGAGATGTAGTT
---GGGAATTGTAGT-
 A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----GMCGGGAGATGTAGTT
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GMCGGGAGATGTAGTT
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GMCGGGAGATGTAGTT--
--TGGGCGACGTCGTTAA
 A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GMCGGGAGATGTAGTT
TGGCGGGAAAHB-----
 A C G T A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GMCGGGAGATGTAGTT-
-------NNTGTGGTTT
 A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GMCGGGAGATGTAGTT
GGGCGGGAAGG------
 A C G T A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GMCGGGAGATGTAGTT
GGCGGGAARN------
 A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GMCGGGAGATGTAGTT-
-------GCTGTGGTTT
 A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GMCGGGAGATGTAGTT--
------NNHTGTGGTTWN
 A C T G T G A C G A T C A C T G A C T G A C T G G T C A T C A G C G T A C A G T A C T G A C G T C G T A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G