Information for 9-SRGMGGCAAGCTG (Motif 12)

A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G
Reverse Opposite:
A G T C G T C A A C T G A T G C A C G T A C G T A C T G A G T C A G T C A C G T A G T C G A C T A T C G
p-value:1e-7
log p-value:-1.626e+01
Information Content per bp:1.884
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.2 +/- 27.2bp
Average Position of motif in Background61.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SRGMGGCAAGCTG
--AAGGCAAGTGT
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:SRGMGGCAAGCTG
------CAAGCTT
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:SRGMGGCAAGCTG---
------CCAGCTGTTN
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:SRGMGGCAAGCTG
GGGCGGGAAGG--
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:SRGMGGCAAGCTG---
------HCAGCTGDTN
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:SRGMGGCAAGCTG---
------CCTGCTGAGH
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SRGMGGCAAGCTG
-GGCGGGAARN--
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:SRGMGGCAAGCTG--
-----GCCATCTGTT
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:SRGMGGCAAGCTG----
-----GCCAGCTGBTNB
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:SRGMGGCAAGCTG--
-------CAGCTGNT
 A T G C C T A G A C T G G T C A A C T G A C T G A G T C G T C A C G T A A T C G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T