Information for 1-YSATTGGYYR (Motif 1)

A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A
Reverse Opposite:
G A C T T C G A C T G A A G T C A G T C C G T A C T G A G A C T T A G C T C G A
p-value:1e-237
log p-value:-5.468e+02
Information Content per bp:1.669
Number of Target Sequences with motif301.0
Percentage of Target Sequences with motif55.33%
Number of Background Sequences with motif914.2
Percentage of Background Sequences with motif4.94%
Average Position of motif in Targets52.6 +/- 23.0bp
Average Position of motif in Background49.4 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:YSATTGGYYR--
TGATTGGCTANN
 A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYR
CCGATTGGCT-
 A C G T A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYR----
CTGATTGGTCNATTT
 A C G T A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.83
Offset:-7
Orientation:forward strand
Alignment:-------YSATTGGYYR-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYR
TTGATTGN---
 A C G T A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.75
Offset:3
Orientation:forward strand
Alignment:YSATTGGYYR
---TTGGCA-
 A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYR
NTAATTGG---
 A C G T A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYR
NTAATTGG---
 A C G T A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:9
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----YSATTGGYYR--
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------YSATTGGYYR-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G C T G A A G C T C G A T C T A G A C T G G A C T A G C T C T G A A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G