Information for 9-TGABTGACAG (Motif 6)

C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G
Reverse Opposite:
A T G C G A C T T C A G C G A T G T A C T G C A T A C G A G C T A T G C G C T A
p-value:1e-15
log p-value:-3.625e+01
Information Content per bp:1.604
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif271.6
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets44.0 +/- 24.7bp
Average Position of motif in Background47.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-TGABTGACAG-
NTGATTGACAGN
 A C G T C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-TGABTGACAG-
BTGABTGACAGS
 A C G T C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGABTGACAG--
TGAGTGACAGSC
 C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGABTGACAG
---TTGACAG
 C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGABTGACAG-
---TTGACAGG
 C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGABTGACAG-
---TTGACAGC
 C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGABTGACAG------
NNATTGACAGGTGCTT
 C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGABTGACAG--
--VBTGWCAGCB
 C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T A C G T
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGABTGACAG------
GATATTGACAGCTGCGT
 A C G T C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGABTGACAG------
GGATTGACAGGTCNTT
 C G A T T A C G T C G A A T G C A C G T C A T G G C T A A G T C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T