Information for 17-YCWGMKTCAMGTGTCW (Motif 27)

A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A A G T C C A T G A C G T A C T G C G T A G T A C A C G T A G T C C G A T A C T G C T G A
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 22.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW---
------GCACGTGTCNNNN
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:YCWGMKTCAMGTGTCW
----GGTCACGTGC--
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW
-------CACGTGDC-
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW
-----GTCACGTGGM-
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW
-----GTCACGTGAT-
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW
-----GGCACGTGNC-
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:7
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW
-----GTCACGTGAC-
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW
-------CACGTGNC-
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW
-----GGCACGTGTC-
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:YCWGMKTCAMGTGTCW
---BRGTCACGTGAC-
 A G C T A G T C C G T A A C T G G T C A A C T G G A C T A G T C C G T A G T A C A C T G A C G T A C T G C G A T A G T C C G A T
A C G T A C G T A C G T A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T