Information for 6-TCCCAGYTCTTTGCTC (Motif 11)

C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A C T A G A G T C C G T A C G T A C G T A T A C G C G T A C T A G A G T C C G A T C T A G A C T G T A C G C G T A
p-value:1e-13
log p-value:-3.165e+01
Information Content per bp:1.769
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.2 +/- 16.0bp
Average Position of motif in Background70.2 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCCCAGYTCTTTGCTC----
---TNNTCCTTTGTTCTNNT
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCCCAGYTCTTTGCTC----
---NNNTCCTTTGTTCTNNN
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TCCCAGYTCTTTGCTC-
-------YCTTTGTTCC
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCCCAGYTCTTTGCTC
---CAGCTGTTTCCT-
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C
A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCCCAGYTCTTTGCTC
------NCCATTGTTC
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCCCAGYTCTTTGCTC----
---AATCCCTTTGATCTATC
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCCCAGYTCTTTGCTC----
---ATTTCCTTTGATCTATA
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.55
Offset:9
Orientation:forward strand
Alignment:TCCCAGYTCTTTGCTC
---------ATTGTT-
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCCCAGYTCTTTGCTC----
----NNTTTATTGTTCTNNN
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCCAGYTCTTTGCTC-----
----AATCAATTGTTCCGCTA
 C G A T A T G C A G T C A G T C C G T A A C T G A G T C G A C T A G T C G C A T A C G T A C G T A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A