Information for 6-ACATGTGTGA (Motif 9)

G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
Reverse Opposite:
A G C T A T G C G C T A G A T C C G T A G A T C C T G A A G C T A C T G C A G T
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.715
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif627.7
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets54.6 +/- 23.5bp
Average Position of motif in Background50.6 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGTGA
ACCATATGTT-
 A C G T G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGTGA
AACACGTGTT-
 A C G T G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGTGA
GGCACGTGTC-
 A C G T G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGTGA
NVCACGTG---
 A C G T G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGTGA
GHCACGTG---
 A C G T G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ACATGTGTGA
-CACGTGNC-
 G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGTGA
KCCACGTGAC-
 A C G T G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ACATGTGTGA
GCACGTGT--
 G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ACATGTGTGA
NNACCACGTGGT-
 A C G T A C G T A C G T G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACATGTGTGA
-CACGTG---
 G T C A A G T C C T G A A G C T C T A G A C G T C T A G C G A T A T C G T C G A
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T